Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879239.1_cds_XP_016437058.1_32852
CDS Infomation

[gene=LOC107763128] [db_xref=GeneID:107763128] [protein=pentatricopeptide repeat-containing protein At3g49240-like] [protein_id=XP_016437058.1] [location=10224..12242] [gbkey=CDS]
Sequence

ATGGCTCTCTCCAAACACACCTTTTTCACCCATCACCTCAAAACCCTAGCTAAACCCCAT
TATCTCCGCCGCCCTCAACCACCACCACCTTCCTTCATCTCCCTCCGTCTCCTCTCCTTC
GCCACCCCAGAAGAAGCTGCCGCCGAACGCCGTAAACGCAAGCGACGCCTCCGTATTGAA
CCTCCTCTATCCTCCCTCCGCCAACAGCACCAACCTCGTCCTACAACCCCTCAAAACCCT
AGCTCCGCCAATAACCCTAATGCCCCGAAAATCCCCGAAACTGTTTCCGTACTCACCGGA
AATAGACTCAATCTCCATAATAAGATTCTCAAACTGATTCGTGAGAATGATCTAGAAGAA
GCGGCGTTGTACACGCGCCACTCTGTTTACTCCAATTGCCGACCCACTATCTTCACGTGT
AACGCCGTTATGGCTGCACAGCTCCGTCAGTCCCGTTATTCCGACCTGCTCTCACTTCAC
CGGTTCATCACGCAGGCTGGCGTGGCGGCGAACATCGTCACACACAATCTGCTCCTCACG
GCTTATATGGATTGCCGTAAAACTGATATGGCTATGGAACATTACAAACAGCTTATTAAT
AATGCACCATTTAACCCTTCACCTACGACTTATCGGATACTTATTAAAGGACTTGTTGAT
AATAACAAGATTGATAGGGCATTGGAATTGAAGGAGGAAATGTTGTCTAAGGGTTTTAGT
GCTGACCCAATTGTGTATAGTTATTTGATGTCTGGACAAGCTAAGGGTTCAAACCCGGAT
GGTGTTTTCGAACTTTATGAGGAGTTGAAGGAGAAAATGGGAGGGTATGTTTCGGATGGA
GTGGTTTATGGGAGCTTAATGAAAGGTTATTTTTTGAGGGGAATGGAGAAGGAGGCAATG
GAGTCTTATGAGGAAGCTGTGGGTGCGAATTCTAAGATTAAGATGAGTGCAGTGGCGTTT
AACTATGTTTTAGATGCTTTAAGCAAGAATGGGAAGTTTGATGAGGCTTTGAAGTTATTT
GATAGGATGTTGAATGAGCATGATCCTCCTAAAAGATTGACTGTGAATTTGGGTAGCTTT
AATGTGATGGTGGATGGTTATTGTGCATTGGGAAGGTTTAAAGATGCAATTGATGTTTTT
AGCAGCATGGGTGAGAAGAGGTGTAGACCAGACACGTTGTCTTACAATAATCTGATTGAG
CAGTTGTGCAAAAACGACTTGTTGGGTGAGGCTGAGGACCTTTATAAGGATATGGGAGAG
AAGGGGGTCAGCCCCGATGAGTTCACGTTCGTTTTGTTGATGGATACTTGCTTTAAAGAA
AATAGGCCTGATGATGCTGCCATGTATTTTAAGACTATGGTTGATGCTAAATTGAGGCCC
AATCTTGGGGTTTATAATAGGTTGGTTGATGGGTTGGTTAAAGTTGGTAAAGTTGATGAA
GCAAAATCATTTTTTGATTTAATGATGGGAAAGCTGAGGATGAATGATGATAGCTACAAG
TTTATGATGAATGCATTGTTCGAGATTGGAAAGCATGATGAGGTGCTTAAGATTGTGGAT
AGAATGTTAAGGGAGGATCCAGCCGATTTCACTGATGAGTTGCAAGAGTTTATTCGAGAA
GCCTTGAAGAAGGAAGGTAGAGACGAGGAGTTGACCAAGCTTATGGATGACATTGAAAGA
GAGAAGAAAGAAGCTGCAGCCGCAGAAGCTGAAGCAGCTGAAAGAGCAAAGGCGAGTGCA
AGAGCTGCTGTTTCTTCTTTGATAAATAGTCCTAAATTGTTTGGAAATAAGGAGCCCGAA
GAGCAGTCAACAACTGCTGGTGAGGCTGCGAACAACAATGATGATGTTAAACAAGCGGTC
CCTGAAGAAGAGGTGAGTGCTCAAGAAATTGCTGCCGAGGCTAGTTCTTCTGGTGAGGGT
GCAGAAGCTGAGAACCTGGTTGCTACAGAAGCTAGAAGTGATGGTGCAGAAGCTGAGAAC
CTAGCTGCTACAGAAGCTAGAAGTGATGGTGCAGTTTGA

Peptide Sequence

PEP ID

XP_016437058.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g49240-like [Nicotiana tabacum]
Sequence

MALSKHTFFTHHLKTLAKPHYLRRPQPPPPSFISLRLLSFATPEEAAAERRKRKRRLRIE
PPLSSLRQQHQPRPTTPQNPSSANNPNAPKIPETVSVLTGNRLNLHNKILKLIRENDLEE
AALYTRHSVYSNCRPTIFTCNAVMAAQLRQSRYSDLLSLHRFITQAGVAANIVTHNLLLT
AYMDCRKTDMAMEHYKQLINNAPFNPSPTTYRILIKGLVDNNKIDRALELKEEMLSKGFS
ADPIVYSYLMSGQAKGSNPDGVFELYEELKEKMGGYVSDGVVYGSLMKGYFLRGMEKEAM
ESYEEAVGANSKIKMSAVAFNYVLDALSKNGKFDEALKLFDRMLNEHDPPKRLTVNLGSF
NVMVDGYCALGRFKDAIDVFSSMGEKRCRPDTLSYNNLIEQLCKNDLLGEAEDLYKDMGE
KGVSPDEFTFVLLMDTCFKENRPDDAAMYFKTMVDAKLRPNLGVYNRLVDGLVKVGKVDE
AKSFFDLMMGKLRMNDDSYKFMMNALFEIGKHDEVLKIVDRMLREDPADFTDELQEFIRE
ALKKEGRDEELTKLMDDIEREKKEAAAAEAEAAERAKASARAAVSSLINSPKLFGNKEPE
EQSTTAGEAANNNDDVKQAVPEEEVSAQEIAAEASSSGEGAEAENLVATEARSDGAEAEN
LAATEARSDGAV

Transcript Sequence

Gene sequence data has not been registered.